Managing and assembling population-scale data streams, tools and workflows to plan for future pandemics within the INFORM-Africa Consortium

Jenicca Poongavanan; Joicymara Xavier; Marcel Dunaiski; Houriiyah Tegally; Sunday O. Oladejo; Olawole Ayorinde; Eduan Wilkinson; Cheryl Baxter; Tulio de Oliveira

doi:10.17159/sajs.2023/14659

Authors

Jenicca Poongavanan Centre for Epidemic Response and Innovation (CERI), School for Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa https://orcid.org/0000-0002-8730-1046
Joicymara Xavier 1.Institute of Agricultural Sciences, Federal University of Vales do Jequitinhonha e Mucuri, Unaí, Brazil; 2.René Rachou Institute, Oswaldo Cruz Foundation, Belo Horizonte, Brazil; 3.Institute of Biological Science, Federal University of Minas Gerais, Belo Horizonte, Brazil https://orcid.org/0000-0002-4649-6270
Marcel Dunaiski Department of Computer Science, School for Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa https://orcid.org/0000-0003-1957-3979
Houriiyah Tegally 1.Centre for Epidemic Response and Innovation (CERI), School for Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa; 2.KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa https://orcid.org/0000-0002-7102-8540
Sunday O. Oladejo Centre for Epidemic Response and Innovation (CERI), School for Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa https://orcid.org/0000-0001-9573-5189
Olawole Ayorinde Institute of Human Virology, Abuja, Nigeria https://orcid.org/0000-0003-3454-3081
Eduan Wilkinson Centre for Epidemic Response and Innovation (CERI), School for Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa https://orcid.org/0000-0002-2503-9441
Cheryl Baxter 1.Centre for Epidemic Response and Innovation (CERI), School for Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa; 2.Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa https://orcid.org/0000-0002-6033-7655
Tulio de Oliveira 1.Centre for Epidemic Response and Innovation (CERI), School for Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa; 2.KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa; 3.Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa; 4.Department of Global Health, University of Washington, Seattle, WA, USA https://orcid.org/0000-0002-3027-5254