Habitat preferences and movement of yellowfishes in the Vaal River Page 1 of 8 Habitat preferences and movement of adult yellowfishes in the Vaal River , South Africa

The yellowfishes of the Vaal River (Labeobarbus kimberleyensis and L. aeneus) are charismatic, socially and economically important fishes, but very little is known about their interspecies habitat preferences and movement. This study is the first behavioural study of yellowfish in the Vaal River using radio transmitters to characterise habitat preferences and movement patterns. A total of 22 adult L. kimberleyensis and 13 adult L. aeneus individuals were tracked for between 1 month and 1 year from 23 September 2006 to 16 May 2010. Radio telemetry revealed that yellowfish established routine daily behavioural patterns through which the habitat preferences and movement of the species could be established. Home ranges of the yellowfish ranged from 1 km to more than 12 km in the Vaal River depending on the species and habitat availability. Habitat preferences varied between species and included deep slow-flowing habitats with associated cover features particularly in winter for L. kimberleyensis and shallow fast-flowing habitats particularly for L. aeneus in spring, summer and autumn. Changes in flows, habitat availability and atmospheric pressure affected the movement of yellowfish. The biology and ecology of the yellowfish in the Vaal River is noticeably more complicated and dynamic than previously documented. We recommend that the behavioural ecology of these and other yellowfish populations in the Vaal River should continue to be characterised, and the use of the movement of yellowfish be developed as an indicator of ecosystem change.


Introduction
Knowledge of habitat use and associated requirements is needed to inform the management of fishes and the ecosystems in which they occur, 1,2 particularly for economically important species. 2,3[6] The Orange-Vaal largemouth yellowfish Labeobarbus kimberleyensis (Gilchrist and Thompson, 1913), and the Orange-Vaal smallmouth yellowfish L. aeneus (Burchell, 1822) are charismatic fishes that have both social and economic value in the Orange-Vaal River system in southern Africa. 7,8][10] The Vaal River Labeobarbus spp.][13] Numerous water quality, quantity and habitat alteration impacts that negatively affect the biodiversity of the Vaal River have been identified. 10,14Notwithstanding the highly degraded habitat in the Vaal River, L. aeneus is abundant while L. kimberleyensis is rare.Labeobarbus aeneus is a 'Least Concern' species that is invasive in extra-limital situations throughout South Africa. 15In contrast, L. kimberleyensis is relatively rare and regarded as 'Near Threatened'. 13,16,17Although aspects of the biology and ecology of the Vaal River yellowfishes have been documented, their respective interspecies behavioural ecology, which is important to their management and conservation, is poorly known. 14havioural studies incorporating radio telemetry techniques have been used extensively to evaluate fish biology, ecology and ecotoxicology. 4,6[25] In this experiment we tested the hypothesis that the spatial area use, habitat preferences and movement patterns of the yellowfish in the Vaal River differ between species.The aim of this study was to monitor the locations of a sample of adult L. kimberleyensis and L. aeneus over an extended period of time in the Vaal River and characterise the habitat use and movement patterns of the individuals.In this paper, we present the findings of the first dedicated radio telemetry based behavioural study carried out on adult L. kimberleyensis (n=22) and L. aeneus (n=13) in the Vaal River.

Study area
The study was carried out in a reach of the middle Vaal River, southwest of Johannesburg (Figure 1).The study area is located within the Orange-Vaal River Yellowfish Conservation and Management Association (OVRYCMA) area.Site selection was based on local OVRYCMA member information, historical catch records for yellowfish, historical data 5 and initial field surveys to ascertain the presence of sufficient adult yellowfish individuals for the study.The approximately 190-km reach of the Vaal River selected for the study extends from Parys to an area upstream of Bothaville (Figure 1).Within this reach, both L. kimberleyensis and L. aeneus are abundant, 4 despite disturbances such as water abstraction for agriculture, industry and mine use, wastewater releases and the use of natural products.Habitat diversity was considered to be representative of the middle reach of the Vaal River and included a high diversity of both deep (>3 m) and shallow areas (<1 m) with slow-(0 m/s) and fast-flowing (1 m/s) biotope types.Although some gauging weirs and other barriers that may affect the movement of yellowfish exist in the study area, all of the yellowfish monitored in the study had access to relatively large reaches of the Vaal River (>35 km).

Tagging methods
Adult L. kimberleyensis (n=22) and L. aeneus (n=13) were monitored for up to 1 year.Radio transmitters (Advanced Telemetry Systems Inc. (ATS), Isanti, MN, USA) were attached and manually tracked from 7 July 2007 to 24 August 2010 (see Supplementary table 1 online for transmitter data).In this study, ATS model 2030 and 2120 external mount transmitters, ATS R2100 and R4500 receivers and Yagi 4-element antennae were used for tracking.Monitoring surveys were carried out on foot along the bank of the Vaal River, in small inflatable boats and by air in a fixed wing aircraft, using standard approaches. 25Adult yellowfish weighing 1050-6200 g were selected for the study to ensure that the transmitters did not exceed 2% of their mass, 26 as the effects of the tags were not evaluated directly. 13,27,28llowfish were captured using various netting and angling techniques as well as a boat-mounted electrofisher (1 kV).The netting techniques included the use of monitored gill nets deployed in the evening and early morning, large fyke net traps and large seine nets.After capture, yellowfish were partially anaesthetised with either 2-phenoxy-ethanol (0.4 mL/L) or clove oil (0.1 mL/L), until signs of partial anaesthesia were evident. 29Transmitters were surgically attached dorsolaterally through the musculature at the base of the dorsal fin using stainless steel wire.Tagging procedures were based on the external attachment methods that have successfully been used in regional biotelemetry studies with ATS transmitters. 25Although the tagged yellowfish were monitored immediately to evaluate survival and recovery from the tagging procedures, we used only behavioural data collected more than 2 weeks after release. 30,31

Spatial behaviour and habitat preferences
Random and dedicated continuous 24-h surveys were carried out.During the monitoring surveys, the positions (±1 m accuracy) of the tagged yellowfish were documented using a detailed georeferenced map of the site or a georeferenced spatial imaging system on a handheld GeoExplorer ® 3000 Trimble (Trimble Navigation Ltd., Sunnyvale, CA, USA).The longitudinal reaches of the river repeatedly traversed by each tagged yellowfish during the study (for a period of up to 1 year) were used to establish home ranges. 32Preferred or high-use areas included river reaches that were considerably smaller than the home range of the individual which were frequented (>25% of the location data) during the study.After locating the tagged yellowfish, the movement or total roaming distance of a tagged yellowfish during four consecutive 10-min intervals was documented.Displacement categories were established to describe inactive (0.1 m/min), slow-moving (1 m/min), fast-moving (5 m/min) or very fast-moving (10 m/min) yellowfish in the study.Additional behavioural data including the habitat associated with the positions of individuals, activity (such as feeding, holding or migrating) and state of various environmental parameters were documented using scoring data sheets and a diary of anecdotal observations.Habitat variables considered included fish cover features, water column depth, water clarity, substrate types and flow-dependent habitat classes 33 (Table 1).To facilitate the evaluation of physical habitat biotope use in relation to availability, three-dimensional digital terrain models of frequently used areas of the study area were generated.Models were generated using ARC GIS ® (ESRI, Redlands, CA, USA) from data that was collected from a Hummingbird ® 789CI (Hummingbird Ltd., Eufaula, AL, USA) side scan fish finder.The influence of changing flow (discharge), temperatures and atmospheric pressure on the movement of the yellowfish were evaluated retrospectively.HOBO ® pendant temperature loggers (Onset Computer Corporation, Bourne, MA, USA), type UA-001-08 were deployed into the study area to log temperatures.Flow data were obtained from the Department of Water Affairs gauging stations -C2H007Q01 at Pilgrims estate in Orkney and C2H018Q01 at Schoemansdrift -located within the study area.Atmospheric pressure was measured using a calibrated SILVA ADC summit weather station/ anemometer (Stockholm, Sweden) that was stationed within the upstream and downstream boundaries of the reach considered.

Data analysis
The location and movement data were analysed for spatial and temporal trends using ARC GIS ® .This analysis allowed for the assessment of the use of spatial area by individuals, the existence of high-use, preferred areas and some relationships between the locations of the tagged fish and environmental variables. 32The habitat selectivity of fish monitored in the study was evaluated using Ivlev's electivity index (E i ). 34,35This test allows for the assessment of the selection of habitat by association in relation to the availability of habitat types (Table 1), generated in the representative digital terrain models in the study as follows: where r i is the percentage of habitat i used by the fish and n i is the percentage of habitat i available in the environment.The electivity index varies from -1 to +1 where values between 0 and +1 indicate habitat preference and 0 to -1 indicate avoidance. 34e influence of seasonality and discharge, substrate, biotope and fish cover feature types, water temperatures and atmospheric pressure differences on movement (measured as maximum displacement per minute, MDPM) were evaluated using a mixed-model analysis of variance 31 with a random coefficients model. 36The combined species data were normally distributed and therefore the Akaike's Information Criteria model selection 37 was used as a multiple comparisons test for significance.These analyses were conducted using SAS version 9.3 (SAS Institute, Cary, NC).The potential influences of daily spring/summer discharge increases (from 10 m 3 /s to 20 m 3 /s) and annual flood flow increases (from 40 m 3 /s to 60 m 3 /s) on the movement of yellowfish were considered.Daily increases in atmospheric pressure between 5 mb and 10 mb were included.The interspecies effect of seasonality, discharge, substrate, biotope and fish cover feature types on the movement of the yellowfishes were analysed following the approach adopted by O'Brien et al. 25 using SPSS 20 (SPSS, Chicago, IL, USA).Mann-Whitney U-tests were employed to test if the coefficients of variation in the MDPM were significantly different at the p=0.05 level.Thereafter, the Kruskal-Wallis test was employed to evaluate the statistical relationships between MDPM and flows and pressures.

Results
The

Labeobarbus kimberleyensis: Spatial behaviour and habitat preferences
The adult L. kimberleyensis individuals that had an average mass of 3500 g (±1212 g) were tracked on 2 to 42 occasions resulting in 1064 fixes (4 every 10 min per observation).After release, the L. kimberleyensis remained largely inactive in close proximity (<150 m) to the release site for 2-3 days, particularly in winter.During these initial recovery periods, suitable deep (>1.5 m) slow-flowing (<0.8 m/s) habitats occupied were frequently (>75%) associated with undercut banks, or some form of cover feature such as overhanging vegetation, submerged or exposed rocky ridges or aquatic vegetation.After the initial recovery, i.e. from day 3, the L. kimberleyensis individuals moved away (500 m to 12 km) from the tagging area.Within 2 weeks, all L. kimberleyensis appeared to have recovered from the tagging process and established routine, repeatable behavioural patterns within large (up to 12 km) defined home ranges 32 (Figure 2).The majority of the L. kimberleyensis used between 4 km and 7 km, with the smallest home range documented to be 1.5 km.Some of the L. kimberleyensis (n=7) tracked for extended periods The L. kimberleyensis tracked in the study made use of a wide range of habitat types that changed during seasons (Figure 3a).Slow-flowing pool and glide habitats were frequented more often than fast-flowing run riffle and rapid habitats.As the seasons progressed from autumn to summer, the frequency of use of pool habitats generally decreased from 54% (autumn) and 57% (winter) to 32% (spring) and 13% (summer).Habitats that were more frequently used during spring and summer included run and riffle habitats, with use increasing from 7% (winter) and 8% (autumn) to approximately 17% (summer and spring) and from 5% (autumn) and 8% (winter) to 19% (spring) and 42% (summer), respectively.The frequency of use of glides by L. kimberleyensis decreased from 32% (autumn) to 25% (summer).Ivlev's electivity scores indicate that L. kimberleyensis in the Vaal River have a preference for glide habitats throughout the year (Figure 3b).Run and riffle habitats were avoided by L. kimberleyensis during autumn and winter and selected during spring and summer.Autumn and winter trends in decreasing preference for habitat types with increasing velocities from glides to rapids were evident.In particular, fast-flowing rapid habitats were avoided by this species throughout the year.Although the tracking results indicate that pools were used frequently, the E i scores indicate that there was slight avoidance of this habitat type, particularly during spring and summer.Box-and-whisker plots include the 25th and 75th percentiles (boxes) and 5th and 95th percentiles (whiskers) of area use.

Labeobarbus aeneus: Spatial behaviour and habitat preferences
We obtained 804 fixes on adult L. aeneus individuals of an average mass of 2707 g (±897 g).Similarly to L. kimberleyensis, after release the L. aeneus remained relatively inactive in suitable deep refuge areas for 2-3 days.After recovery, L. aeneus generally remained within the vicinity (<500 m).Within 2 weeks, all L. aeneus also appeared to have recovered and established routine daily behavioural patterns within moderate home ranges of up to 5.5 km.The majority of the L. aeneus (n=12) exhibited high-use areas of 800 m (maximum 2 km); some individuals (LAEN1, LAEN7 and LAEN13) tracked over extended periods (124-411 days) remained exclusively within these focus areas.
Habitat types frequented by L. aeneus were dominated by glides and pools during winter, glides alone in spring and runs in summer (Figure 3c).A shifting trend in preference for habitats with increasing flows from pools to riffles was observed from autumn to summer.Rapids were infrequently used in spring (9% of the time) and summer (11% of the time).Rapid initial decreases in use frequency of run (31% to 10%) and riffle (22% to 6%) habitats from autumn to winter were observed.This decrease was followed by gradual increases to similar spring levels during summer.The E i scores obtained for L. aeneus indicate that this yellowfish prefers moderate to fast-flowing habitat types throughout the year and avoids pools (Figure 3d).During autumn and winter, the very fast-flowing rapid habitats and fast-flowing riffle habitats (in winter only) were also avoided by L. aeneus for run and glide habitats.

Labeobarbus kimberleyensis: Movement
The L. kimberleyensis monitored in the study generally established routine daily behavioural patterns that varied between seasons (Table 2).These patterns were disrupted when sudden changes in flow and/or water quality occurred.Responses usually involved the occupation of suitable individual specific refuge areas.Each individual demonstrated affinity for fewer than five refuge areas.On occasion, if the disrupted conditions persisted, the individual would vacate its established home range.One such occasion was the extreme case of the flood in January 2010.Although one L. kimberleyensis did not vacate its home range during this event, three others did.Findings showed that although the movement of both yellowfish species increased significantly during spring (p<0.05),no significant seasonal changes in the movement of L. kimberleyensis were observed.Significant (p<0.05)decreases http://www.sajs.co.za in movement were, however, correlated with rapid daily increases in discharge.During 2009 and 2012, as many as seven freshet events that resulted in changes in movement of the yellowfish were documented (Figure 4).Rapid increases in atmospheric pressure in winter were positively correlated with a decrease in movement of L. kimberleyensis (p<0.073).During these events, the L. kimberleyensis individuals would abandon daily behavioural patterns to take refuge in deep habitats for the duration of the weather event, which could last for up to 10 days after the onset of the pressure change (Figure 5).During 2009, three weather events affected the movement of both yellowfishes monitored in the study: 29 July to 01 August (Figure 5, #1), 12 August to 14 August (Figure 5, #2) and 18 August to 20 August (Figure 5, #3).

Labeobarbus aeneus: Movement
Although L. aeneus adopted routine daily behavioural patterns similar to L. kimberleyensis, significant seasonal interspecies differences were observed (p<0.05).In particular, there was a strong correlation (p=0.078) between the increase in movement of L. aeneus and the summer period.Rapid daily increases in discharge resulted in a significant (p<0.05)decrease in the movement of L. aeneus.The interspecies use of biotopes by L. aeneus and L. kimberleyensis differed significantly (p<0.05).Movement of L. aeneus increased significantly when the individuals occupied riffle habitat types (p<0.05).Although a strong correlation (p<0.05)existed between the decrease in movement of L. aeneus and rapid daily increases in atmospheric pressure during winter, no significant relationships were observed.The use of refuge areas by L. aeneus individuals were less obvious than that for L. kimberleyensis and often required a major stimulus such as rapid increases in flows during floods and changes in pressure events.Only a few individuals vacated home ranges during the study.The movements of both species varied seasonally (p=0.055), with a significant increase in the movement of both species in spring (p<0.05).
Similarly to the interspecies considerations, in combination, yellowfish movement changed significantly when discharge increased rapidly (p<0.05) and when atmospheric pressure increased rapidly (p<0.05) with rapid increases (p=0.065) and decreases (p=0.09) in winter being particularly important.Interestingly, in combination the movement of yellowfish was found to change significantly in relation to the use of pools and glide habitats (p<0.05), which were preferred in winter, and riffle habitats (p<0.05), which were preferred in summer.

Discussion
9][40] The outcomes of this study are the first account of the behavioural ecology of any yellowfish (Labeobarbus spp.).Cyprinids have been observed to have a high fidelity for sites ranging from a few hundred metres to many kilometres [40][41][42] but have also been observed to be highly mobile and capable of moving over hundreds of kilometres at a high rate (up to 8 km/day). 42The yellowfish considered in this study showed high fidelity for sites ranging from less than 1 km for L. aeneus to 12 km for L. kimberleyensis.The distribution of some cyprinids is considered to be driven by habitat availability, system morphometry and spawning and seasonal factors. 40Although the reach of the Vaal River used by Labeobarbus spp.may similarly be influenced by habitat requirements and availability, the differences in home range size may be associated with the roaming predatory nature of L. kimberleyensis and omnivorous foraging feeding biology of L. aeneus. 14,28,43,44Labeobarbus kimberleyensis establish home ranges that are, on average, twice the length of those established by L. aeneus.Focus or high-use areas were also established by both species, but were, again, greater for L. kimberleyensis (2 km) than for L. aeneus (800 m).The Vaal River yellowfishes have species-specific preferences for habitat types that differ among seasons, similarly to other cyprinids, 40 indicating that considerable differences in the biology of the species exist.L. kimberleyensis prefers deep (>1 m), slow-flowing pool and glide habitats, particularly during autumn and winter.During these periods, adult predatory yellowfish have access to known prey items including small fishes and large invertebrates. 14The shift towards running water by L. kimberleyensis in summer suggests that the preferred slowflowing habitat types may either become unsuitable during high-flow periods, as a result of changes in temperatures or turbidity for example, or that the species takes advantage of a resource that is only available during these periods. 45Changes in ecosystem variable states such as increases in turbidity have been shown to affect the feeding and breeding behaviour of cyprinids. 38,45L. aeneus appears to be a facultative rheophilic, omnivorous yellowfish that forages predominantly in shallow (<1 m) fast-flowing habitats. 43,44,46,47The gut contents of a L. aeneus population from the Great Fish River were found to be dominated by Simulidae larvae which can easily be obtained by grazing in shallow fastflowing habitats. 48These findings indicate that L. aeneus in the Vaal River frequent a wide range of habitats, including shallow fast-flowing riffles and runs as well as deep slow-flowing pool habitats.Only in autumn and winter, when the flow, temperature and/or atmospheric conditions became variable or unstable, did L. aeneus show an affinity for deep water habitats.The reduction in use of pool habitats in spring and summer may have occurred as a result of possible decreases in oxygen in these habitats at higher temperatures during spring and summer.
Changes in environment have been shown to affect the behaviour of cyprinids. 38In this study the movement of both yellowfishes was shown to be influenced by rapid increases in flow and atmospheric pressure.
Responses involved the coordinated movement of individuals into suitable refuge areas or the vacation of high-use and/or home range areas.Refuge areas consisted of relatively deep areas that were generally sheltered by steep banks, or submerged or emerged rocky ridges for example where water flow and sudden surface-associated temperature changes could be avoided.Freshet and annual flood events caused L. kimberleyensis individuals initially to vacate their existing high-use and/or home range areas.When flow conditions stabilised, the L. kimberleyensis individuals generally did not return to established home ranges but established new home ranges, depending on what seemed to be the availability of resources.
Yellowfish in the Vaal River have historically been known to undertake coordinated upstream spawning migrations during spring or summer. 49n this study, no coordinated upstream migrations were observed.In contrast, when changes in various ecosystem conditions caused individuals with established kernel areas to vacate these areas, both upstream and downstream migrations were observed.Although coordinated upstream spawning migrations may no longer occur, or may occur only during conditions that were not experienced during this study, the frequent uncoordinated upstream and downstream migrations of L. kimberleyensis individuals, in particular, following, for example, rapid increases in flow, may still allow mixing of individuals from different populations.Although the reproductive strategies of L. aeneus have been well documented, only limited information is available for L. kimberleyensis, specifically within riverine habitats. 13,14,27,28,50,51In this study, only one possible spawning event, on 26 October 2007, was documented.This event involved abnormal vigorous interspecies shoaling behaviour of a group (n>5) of L. kimberleyensis, one of which was a tagged individual (LKIM8).The behaviour occurred in a confined (<16 m 2 ) reach of the study area at the base of an island in a relatively deep (±1.6 m) glide that was dominated by sand and gravel.L. kimberleyensis are known to spawn 4 to 6 weeks later than the more cold-tolerant L. aeneus -a fact which is supported by our findings. 13,14,27,28Numerous spawning events of tagged and other L. aeneus were, however, documented in the main stream of the Vaal River and in some smaller side channels.Findings confirm observations elsewhere 28,52 that L. aeneus spawning events are initiated when water temperatures in the Vaal River reach 18.5 °C, in late September to early October.In 2009, Weyl et al. 15 showed that the spawning success of L. aeneus was dependent on access to riverine habitats or suitable lentic habitats where flow cues were available.In this study, spawning events of L. aeneus were coordinated with increases in the frequency of freshet flows during spring when rapid increases in temperature were observed.These events occurred in riffle and rapid habitats where gravel, cobble and boulder substrates dominate.Riverine L. aeneus populations have been observed to use similar gravel beds for spawning and may use other similar habitats (e.g.rocky shores in lentic ecosystems) but actual data is unavailable. 28These findings support the known spawning requirements of L. aeneus, namely that in the Vaal River the population requires water temperatures above 18.5 °C and stream flow cues with access to suitable gravel or cobble beds. 15,284][55][56][57] If these impacts persist, changes in the biology and ecology of the yellowfishes may result and ultimately affect the survivability of these species.The habitat requirements and the behavioural response information of the yellowfishes to changes in flows and weather events can be used to manage yellowfish and the Vaal River in which they occur.To further characterise the biology and ecology of the Vaal River yellowfishes for the management and conservation of these fishes and the Vaal River, we recommend that the behavioural ecology of these and other populations continue to be characterised and used as an indicator of ecosystem change.

Figure 1 :
Figure 1: Map showing the distributions of Labeobarbus kimberleyensis (LKIM) and L. aeneus (LAEN) and the location of the study area on the Vaal River, southern Africa.

Figure 2 :
Figure 2: Graphical representation of the kernel size (kernel) and maximum displacement or area use of adult Labeobarbus kimberleyensis (LKIM) and L. aeneus (LAEN) in the Vaal River.Box-and-whisker plots include the 25th and 75th percentiles (boxes) and 5th and 95th percentiles (whiskers) of area use.

Figure 3 :
Figure 3: Percentage frequency of habitat biotope use by (a) Labeobarbus kimberleyensis and (b) L. aeneus in autumn, winter, spring and summer.Comparative Ivlev's electivity index (E i ) scores for habitat use of (c) L. kimberleyensis and (d) L. aeneus in autumn, winter, spring and summer.

Figure 4 :Figure 5 :
Figure 4: Graphical representation of flow from the Vaal River at Site 2 measured as discharge (m 3 /s), obtained from the Department of Water Affairs gauging weir no C2H018 from (a) 01 June 2009 to 31 March 2010 and (b) 01 July 2009 to 31 December 2009.The flood event (4a, 1/1) and freshet events (4b, 1/8-8/8) considered in the study are indicated. 1 yellowfish were located on 660 occasions resulting in 2640 locality fixes during random monitoring and 78 24-h surveys (see Supplementary table 1 online).As shown in Supplementary table 1, 7 of the 22 L. kimberleyensis and 4 of the 13 L. aeneus individuals contributed to >70% of each species' data.L. kimberleyensis were located every 13.6 days (±67.2 days) and L. aeneus every 6.1 days (±11.2 days).

Table 1 :
Habitat biotope types recorded in the study for yellowfish in the Vaal River

preferences and movement of yellowfishes in the Vaal River
Page 4 of 8 (>6 months) demonstrated high-use areas or focus areas of the Vaal River, of approximately 2 km (maximum 4 km).

Table 2 :
Statistical analysis of the relationships between changes in movement (measured as maximum displacement per minute) of yellowfish in the Vaal River and selected environmental variables using analysis of variance techniques incorporating Akaike's Information Criteria and Mann-Whitney U-tests LKIM, Labeobarbus kimberleyensis; LAEN, Labeobarbus aeneus*denotes significant relationships #denotes interspecies comparisons